su: ignore --preserve-environment, it's mutually exclusive to --login.

Listening on http://127.0.0.1:40955
Rows: 267 Columns: 522
── Column specification ────────────────────────────────────────────────────────
Delimiter: ","
chr  (220): redcap_repeat_instrument, paciente_rut, patient_substr8, patient...
dbl  (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p...
lgl  (121): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu...
dttm   (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm...
date  (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c...

ℹ Use `spec()` to retrieve the full column specification for this data.
ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message.


processing file: ingreso.Rmd
output file: ingreso.knit.md

Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): 
Warning: (fancyhdr)                Make it at least 30.02956pt, for example:
Warning: (fancyhdr)                \setlength{\headheight}{30.02956pt}.
Warning: (fancyhdr)                You might also make \topmargin smaller to compensate:
Warning: (fancyhdr)                \addtolength{\topmargin}{-18.02956pt}.
Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): 
Warning: (fancyhdr)                Make it at least 30.02956pt, for example:
Warning: (fancyhdr)                \setlength{\headheight}{30.02956pt}.
Warning: (fancyhdr)                You might also make \topmargin smaller to compensate:
Warning: (fancyhdr)                \addtolength{\topmargin}{-18.02956pt}.

Output created: /tmp/Rtmp7V4C4K/file73264e34fec3.pdf
Warning in file.create(to[okay]) :
  cannot create file 'reportDir/21640705-9_ingreso_2023-09-08.pdf', reason 'Permission denied'
Rows: 268 Columns: 522
── Column specification ────────────────────────────────────────────────────────
Delimiter: ","
chr  (220): redcap_repeat_instrument, paciente_rut, patient_substr8, patient...
dbl  (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p...
lgl  (121): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu...
dttm   (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm...
date  (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c...

ℹ Use `spec()` to retrieve the full column specification for this data.
ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message.
Warning in file(con, "w") :
  cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694161561990225000.json': Permission denied
Warning: Error in file: cannot open the connection
  34: file
  33: writeLines
  32: jsonlite::write_json
  31: write_logs_json
  30: write_logs
  29: callback
   1: runApp


processing file: ingreso.Rmd
output file: ingreso.knit.md

Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): 
Warning: (fancyhdr)                Make it at least 30.02956pt, for example:
Warning: (fancyhdr)                \setlength{\headheight}{30.02956pt}.
Warning: (fancyhdr)                You might also make \topmargin smaller to compensate:
Warning: (fancyhdr)                \addtolength{\topmargin}{-18.02956pt}.
Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): 
Warning: (fancyhdr)                Make it at least 30.02956pt, for example:
Warning: (fancyhdr)                \setlength{\headheight}{30.02956pt}.
Warning: (fancyhdr)                You might also make \topmargin smaller to compensate:
Warning: (fancyhdr)                \addtolength{\topmargin}{-18.02956pt}.

Output created: /tmp/Rtmp7V4C4K/file732645846b21.pdf
Warning in file.create(to[okay]) :
  cannot create file 'reportDir/4537755-5_ingreso_2023-09-08.pdf', reason 'Permission denied'

 *** caught segfault ***
address 0x81, cause 'memory not mapped'

Traceback:
 1: execCallbacks(timeoutSecs, all, loop$id)
 2: run_now(timeoutMs/1000, all = FALSE)
 3: service(timeout)
 4: serviceApp()
 5: ..stacktracefloor..(serviceApp())
 6: withCallingHandlers(expr, error = doCaptureStack)
 7: domain$wrapSync(expr)
 8: promises::with_promise_domain(createStackTracePromiseDomain(),     expr)
 9: captureStackTraces({    while (!.globals$stopped) {        ..stacktracefloor..(serviceApp())    }})
10: ..stacktraceoff..(captureStackTraces({    while (!.globals$stopped) {        ..stacktracefloor..(serviceApp())    }}))
11: runApp(Sys.getenv("SHINY_APP"), port = port, launch.browser = FALSE)
An irrecoverable exception occurred. R is aborting now ...
-bash: line 1: 29478 Segmentation fault      R --no-save --slave -f \/opt\/shiny-server\/R\/SockJSAdapter\.R