su: ignore --preserve-environment, it's mutually exclusive to --login. Listening on http://127.0.0.1:34770 Rows: 292 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file53617862b3a.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/9036304-2_ingreso_2023-09-12.pdf', reason 'Permission denied' Rows: 293 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file53611708d520.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/6498505-1_ingreso_2023-09-12.pdf', reason 'Permission denied' Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694515386549023000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp Rows: 294 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file53613cc318b8.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/5868844-4_ingreso_2023-09-12.pdf', reason 'Permission denied' Rows: 294 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file5361696b3f40.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/5868844-4_ingreso_2023-09-12.pdf', reason 'Permission denied' processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file5361603bdd49.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/5868844-4_ingreso_2023-09-12.pdf', reason 'Permission denied' Rows: 294 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. Rows: 294 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file53613e6ceabf.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/5868844-4_ingreso_2023-09-12.pdf', reason 'Permission denied' Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694551478580637000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694551480216373000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694549979581553000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp Rows: 297 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file53612db6f42e.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/13047853-0_ingreso_2023-09-12.pdf', reason 'Permission denied' Rows: 297 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694571920754871000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp Rows: 298 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. Rows: 298 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694573052228398000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694573087840968000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp Rows: 298 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file53614f159320.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/4889436-4_ingreso_2023-09-13.pdf', reason 'Permission denied' Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694581665946436000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp Rows: 299 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file5361226917e9.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/5043105-3_ingreso_2023-09-13.pdf', reason 'Permission denied' processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file536139cb8ab.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/04509899-0_ingreso_2023-09-13.pdf', reason 'Permission denied' Rows: 299 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694587263483137000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file5361467d14e.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/13047853-0_ingreso_2023-09-13.pdf', reason 'Permission denied' Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694496024635797000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694549822147479000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp Rows: 299 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. processing file: ingreso.Rmd output file: ingreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file5361a24884.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/04509899-0_ingreso_2023-09-13.pdf', reason 'Permission denied' Rows: 299 Columns: 522 ── Column specification ──────────────────────────────────────────────────────── Delimiter: "," chr (221): redcap_repeat_instrument, paciente_rut, patient_substr8, patient... dbl (150): record_id, redcap_repeat_instance, patient_l, patient_substr1, p... lgl (120): cama_paciente, paciente_edad, alcohol_carga_v2, tipo_de_inmunosu... dttm (8): fecha_hospitalizacion, fecha_ingreso_uci, vmi_fecha_inicio_1, vm... date (23): datos_generales_today, fech, f_nac, antecedentes_today, vacuna_c... ℹ Use `spec()` to retrieve the full column specification for this data. ℹ Specify the column types or set `show_col_types = FALSE` to quiet this message. processing file: egreso.Rmd output file: egreso.knit.md Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Warning: Package fancyhdr Warning: \headheight is too small (12.0pt): Warning: (fancyhdr) Make it at least 30.02956pt, for example: Warning: (fancyhdr) \setlength{\headheight}{30.02956pt}. Warning: (fancyhdr) You might also make \topmargin smaller to compensate: Warning: (fancyhdr) \addtolength{\topmargin}{-18.02956pt}. Output created: /tmp/RtmpAdvhgz/file5361c43b2ef.pdf Warning in file.create(to[okay]) : cannot create file 'reportDir/9036304-2_egreso_2023-09-13.pdf', reason 'Permission denied' Warning in file(con, "w") : cannot open file '/home/app/ShinyApps/UCI/logs/UCI/shinylogs_UCI_1694612585740350000.json': Permission denied Warning: Error in file: cannot open the connection 34: file 33: writeLines 32: jsonlite::write_json 31: write_logs_json 30: write_logs 29: callback 1: runApp R: src/unix/core.c:299: uv__finish_close: Assertion `0' failed. -bash: line 1: 21345 Aborted R --no-save --slave -f \/opt\/shiny-server\/R\/SockJSAdapter\.R